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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916480.1_cds_XP_016466198.1_59076
CDS Infomation

[gene=LOC107788963] [db_xref=GeneID:107788963] [protein=15-cis-phytoene desaturase, chloroplastic/chromoplastic-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016466198.1] [location=join(195961..196182,196271..196403,197196..197284,197764..197821,198046..198201,198504..198652,198817..198936,199101..199314,199409..199511,199782..>199814)] [gbkey=CDS]
Sequence

ATGCCCCAAATTGGACTTGTTTCTGCCGTTAATTTGAGAGTCCAAGGTAATTCAGCTTAT
CTTTGGAGCTCGAGGTCTTCGTTGGGAACTGAAAGTCAAGATGGTCGCTTGCAAAGGAAT
TTGTTATGTTTTGGTAGTAGCGACTCCATGGGGCATAAGTTAAGGATTCGTACTCCCAGT
GCCACGACCAGAAGATTGACAAAGGACTTTAATCCTTTAAAGGTAGTCTGCATTGATTAT
CCAAGACCAGAGCTAGACAATACAGTTAACTATTTGGAGGCGGCGTTATTATCATCATCA
TTTCGTACTTCCTCACGCCCAACTAAACCATTGGAGATTGTTATTGCTGGTGCAGGTTTG
GGTGGTTTGTCTACAGCAAAATATCTGGCAGATGCTGGTCACAAACCGATATTGCTGGAG
GCAAGAGATGTCCTAGGTGGAAAGGTAGCTGCATGGAAAGATGATGATGGAGATTGGTAT
GAGACTGGGTTGCATATATTCTTTGGGGCTTACCCAAATATGCAGAACCTGTTTGGAGAA
CTAGGGATTAACGATCGATTGCAGTGGAAGGAACATTCAATGATATTTGCGATGCCTAAC
AAGCCAGGGGAATTCAGCCGCTTTGATTTTCCTGAAGCTCTTCCTGCGCCATTAAATGGA
ATTTTGGCCATACTAAAGAACAATGAAATGCTTACATGGCCCGAAAAAGTCAAATTTGCT
ATTGGACTCTTGCCAGCAATGCTTGGAGGGCAATCTTATGTTGAAGCTCAAGACGGTTTA
AGTGTTAAGGACTGGATGAGAAAGCAAGGTGTGCCTGATAGGGTGACAGATGAGGTGTTC
ATTGCCATGTCAAAGGCACTTAACTTCATAAACCCTGACGAGCTTTCGATGCAGTGCATT
TTGATTGCTTTGAACAGATTTCTTCAGGAGAAACATGGTTCAAAAATGGCCTTTTTAGAT
GGTAACCCTCCTGAGAGACTTTGCATGCCGATTGTTGAACATATTGAGTCAAAAGGTGGC
CAAGTCAGACTAAACTCACGAATAAAAAAGATTGAGCTCAATGAGGATGGAAGTGTCAAA
TGTTTTATACTGAATAATGGCAGTACAATTAAAGGAGATGCTTTTGTGTTTGCCACTCCA
GTGGATATCTTCAAGCTTCTTTTGCCTGAAGACTGGAAAGAGATCCCATATTTCCAAAAG
TTGGAGAAGCTAGTGGGAGTTCCTGTGATAAATGTCCATATATGGTTTGACAGAAAACTG
AAGAACACATCTGATAA

Peptide Sequence

PEP ID

XP_016466198.1
PEP Infomation

PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Nicotiana tabacum]
Sequence

MPQIGLVSAVNLRVQGNSAYLWSSRSSLGTESQDGRLQRNLLCFGSSDSMGHKLRIRTPS
ATTRRLTKDFNPLKVVCIDYPRPELDNTVNYLEAALLSSSFRTSSRPTKPLEIVIAGAGL
GGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNMQNLFGE
LGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEALPAPLNGILAILKNNEMLTWPEKVKFA
IGLLPAMLGGQSYVEAQDGLSVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCI
LIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVK
CFILNNGSTIKGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKL
KNTSDNLLFSRFIFDQFYCSRAVSACP

Transcript Sequence

Gene sequence data has not been registered.